Outlined below are the species currently supported for the different experiment types on ROSALIND, but we are always adding more if you see one missing
RNA-seq and Lexogen QuantSeq:
- Mammals: Human (Homo Sapiens), Mouse (Mus Musculus), Rat (Rattus Norvegicus), Crab-eating Monkey (Macaca fascicularis), Rhesus Monkey (Macaca mulatta), Canine (Canis familiaris), Chinese Hamster (Cricetulus griseus), and Pig (Sus Scrofa)
- Insects: Fruit Fly (Drosophila Melanogaster)
- Fishes: Zebrafish (Danio Rerio) Cavefish (Astyanax mexicanus)
- Birds: Chicken (Gallus gallus) and Zebra Finch (Taeniopygia guttata)
- Worms: C. Elegans (Caenorhabditis Elegans)
- Plants: Arabidopsis (Arabidopsis Thaliana)
- Fungi: Yeast (Saccharomyces Cerevisiae)
- Virus: SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2)
- Other: S. Mansoni (Schistosoma mansoni)
Nanostring Gene Expression
- Mammals: Human (Homo Sapiens), Mouse (Mus Musculus), Rat (Rattus Norvegicus), Crab-eating Monkey (Macaca fascicularis), Rhesus Monkey (Macaca mulatta), Canine (Canis familiaris), Chinese Hamster (Cricetulus griseus), and Pig (Sus Scrofa)
- Birds: Chicken (Gallus gallus), Zebra Finch (Taeniopygia guttata)
- Fish: Zebrafish (Danio Rerio), Cavefish (Astyanax mexicanus)
- Insects: Fruit Fly (Drosophila Melanogaster)
- Fungi:Yeast (Saccharomyces Cerevisiae)
Small RNA-seq, and miRNA for Nanostring nCounter:
- Mammals: Human (Homo Sapiens), Mouse (Mus Musculus), Rat (Rattus Norvegicus)
10X Genomics scRNA-seq, ATAC-seq, and ChIP-seq:
- Mammals: Human (Homo Sapiens), Mouse (Mus Musculus), Rat (Rattus Norvegicus)
- Insects: Fruit Fly (Drosophila Melanogaster)
- Fishes: Zebrafish (Danio Rerio)
- Birds: Zebra Finch (Taeniopygia guttata)
- Worms: C. Elegans (Caenorhabditis Elegans)
- Plants: Arabidopsis (Arabidopsis Thaliana)
- Fungi: Yeast (Saccharomyces Cerevisiae)
- Virus: SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2)
Not seeing your species listed? Please contact sales@rosalind.bio